Basic Information
Locus ID:
gene-QYE76_063743
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 143635007 | 143636098 | - | gene-QYE76_063743 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 39,580.73 Da | 41.70 | 75.59 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 157 | 5.54015E-29 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 200 | 303 | 3.1E-21 | IPR000210 |
| Pfam | PF00917 | MATH domain | 50 | 154 | 2.1E-5 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 201 | 298 | 2.36E-20 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 159 | 4.25E-34 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 160 | 1.0E-30 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 189 | 303 | 2.2E-26 | IPR011333 |
| SMART | SM00225 | BTB_4 | 202 | 304 | 1.9E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 202 | 269 | 15.390453 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 29 | 157 | 21.925112 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 363 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_051229342.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6Z0J0 | BTB domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |