Basic Information
Locus ID:
gene-QYE76_063559
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 137213934 | 137218504 | - | gene-QYE76_063559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 79,649.55 Da | 47.28 | 65.00 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 219 | 311 | 1.6E-11 | IPR005162 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 499 | - | - |
| Coils | Coil | Coil | 637 | 657 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051183779.1 | uncharacterized protein LOC127297497 [Lolium perenne] | 0 |
| TrEMBL | A0A2T2PTT2 | Retrotrans_gag domain-containing protein OS=Bradyrhizobium sp. MOS002 OX=2133947 GN=C7G41_36765 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 77 | gene-QYE76_000700, gene-QYE76_000963, gene-QYE76_001054 ... |