Basic Information
Locus ID:
gene-QYE76_062972
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 114986666 | 114992945 | + | gene-QYE76_062972 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.77 | 145,164.33 Da | 52.03 | 105.16 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 148 | 285 | 0.00752865 | - |
| Pfam | PF00931 | NB-ARC domain | 153 | 390 | 5.5E-41 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 10 | 82 | 2.0E-9 | IPR041118 |
| SUPERFAMILY | SSF52058 | L domain-like | 695 | 1083 | 9.01E-30 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 474 | 769 | 2.55E-47 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 403 | 1.31E-56 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1104 | 1269 | 6.8E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 873 | 1086 | 4.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 134 | 298 | 3.4E-33 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 781 | 872 | 5.9E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 780 | 8.2E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1114 | 1279 | 2.6E-31 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 9 | 113 | 1.1E-6 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 389 | 485 | 4.9E-14 | IPR036388 |
| Gene3D | G3DSA:1.10.8.430 | - | 304 | 388 | 7.3E-11 | IPR042197 |
| SMART | SM00369 | LRR_typ_2 | 1233 | 1256 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 796 | 819 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 665 | 688 | 2.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 712 | 735 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1209 | 1232 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 736 | 759 | 170.0 | IPR003591 |
| PRINTS | PR00364 | Disease resistance protein signature | 242 | 256 | 3.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 341 | 355 | 3.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 734 | 750 | 3.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 170 | 185 | 3.9E-20 | - |
| Coils | Coil | Coil | 94 | 114 | - | - |
| Coils | Coil | Coil | 36 | 56 | - | - |
| Coils | Coil | Coil | 896 | 916 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14460.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_047087725.1 | putative disease resistance protein RGA1 isoform X1 [Lolium rigidum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | C5WU54 | Disease resistance protein RGA3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G178700 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology