Basic Information
Locus ID:
gene-QYE76_062904
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 112516921 | 112520786 | + | gene-QYE76_062904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 37,348.36 Da | 51.66 | 75.69 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 67 | 125 | 2.2E-4 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 54 | 144 | 1.49E-10 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 59 | 133 | 2.7E-8 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 64 | 133 | 0.0017 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 63 | 137 | 10.189634 | IPR000504 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 57 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67950.3 | RNA-binding (RRM/RBD/RNP motifs) family protein. | 0 |
| RefSeq | XP_047088437.1 | binding partner of ACD11 1-like [Lolium rigidum] | 0 |
| Q9LFD5 | Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1 | 0 | |
| TrEMBL | I1GP03 | RRM domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100824754 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology