Basic Information
Locus ID:
gene-QYE76_062900
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 112357163 | 112359061 | - | gene-QYE76_062900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 41,442.11 Da | 32.87 | 87.67 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 230 | 384 | 3.88372E-77 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 33 | 203 | 7.05202E-56 | - |
| Pfam | PF00190 | Cupin | 37 | 184 | 6.5E-24 | IPR006045 |
| Pfam | PF00190 | Cupin | 224 | 370 | 4.7E-24 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 30 | 376 | 8.62E-49 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 226 | 387 | 1.6E-50 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 50 | 211 | 9.3E-28 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 32 | 189 | 6.3E-30 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 227 | 371 | 7.5E-20 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 326 | 344 | 1.4E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 243 | 263 | 1.4E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 290 | 306 | 1.4E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 348 | 365 | 1.4E-14 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 308 | 323 | 1.4E-14 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_051230458.1 | legumin A-like [Lolium perenne] | 0 |
| P07730 | Glutelin type-A 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA2 PE=1 SV=1 | 0 | |
| TrEMBL | F2D9Z5 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology