Basic Information
Locus ID:
gene-QYE76_062848
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 110439904 | 110444567 | - | gene-QYE76_062848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 62,852.68 Da | 55.90 | 54.81 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 342 | 368 | 4.1E-8 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 375 | 400 | 6.2E-4 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 301 | 325 | 2.3E-4 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 335 | 369 | 1.45E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 298 | 330 | 8.63E-7 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 369 | 403 | 2.24E-5 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 332 | 370 | 1.7E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 371 | 403 | 6.1E-10 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 293 | 331 | 2.1E-12 | - |
| SMART | SM00547 | zf_4 | 303 | 327 | 8.0E-5 | IPR001876 |
| SMART | SM00547 | zf_4 | 342 | 366 | 3.7E-5 | IPR001876 |
| SMART | SM00547 | zf_4 | 375 | 399 | 2.0E-4 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 340 | 369 | 9.935647 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 301 | 330 | 9.574297 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 373 | 402 | 9.754972 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 344 | 363 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 377 | 396 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 565 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55040.1 | zinc finger (Ran-binding) family protein. | 0 |
| RefSeq | XP_051178757.1 | zinc finger protein VAR3, chloroplastic-like [Lolium perenne] | 0 |
| TrEMBL | A0A0Q3JNP7 | Zinc finger protein VAR3, chloroplastic OS=Brachypodium distachyon OX=15368 GN=100833528 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology