halophFGD

Basic Information

Locus ID: gene-QYE76_062602

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Short Name: MLH1

Description: DNA mismatch repair protein Mlh1 C-terminus

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	101756631	101766667	+	gene-QYE76_062602

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.24	103,158.94 Da	60.96	69.04	-0.60

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04827	Plant transposon protein	658	839	1.6E-76	IPR006912
MobiDBLite	mobidb-lite	consensus disorder prediction	360	460	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	414	429	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	152	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	129	147	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	28	42	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	85	128	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	66	84	-	-

Gene Ontology

Molecular Function:

GO:0016788 (hydrolase activity, acting on ester bonds)

KEGG Pathway

KO Term:

K08734 (DNA mismatch repair protein MLH1)

Pathway:

ko01524 (Platinum drug resistance) map01524 (Platinum drug resistance) ko03430 (Mismatch repair) map03430 (Mismatch repair) ko03460 (Fanconi anemia pathway) map03460 (Fanconi anemia pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G13770.1
RefSeq	XP_051202057.1	uncharacterized protein LOC127315626 [Lolium perenne]
TrEMBL	M8AQL9	PMD domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	2	gene_22672, gene_9527
Amaranthaceae	Atriplex hortensis	1	Ah037633
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17534, Sbi_jg23502, Sbi_jg31094, Sbi_jg44651
Amaranthaceae	Salicornia europaea	1	Seu_jg2289
Amaranthaceae	Suaeda glauca	29	Sgl13894, Sgl14989, Sgl15286, Sgl19056, Sgl19062, Sgl20125 ... Sgl21013, Sgl23627, Sgl25509, Sgl25511, Sgl26382, Sgl30139, Sgl30675, Sgl30677, Sgl32069, Sgl33032, Sgl36107, Sgl37368, Sgl38298, Sgl39155, Sgl41408, Sgl42437, Sgl47166, Sgl52987, Sgl58263, Sgl64553, Sgl68999, Sgl80159, Sgl82588
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000002675, gene:ENSEOMG00000003176 ... gene:ENSEOMG00000005980, gene:ENSEOMG00000006972, gene:ENSEOMG00000008354, gene:ENSEOMG00000010408, gene:ENSEOMG00000015758, gene:ENSEOMG00000023199, gene:ENSEOMG00000033073, gene:ENSEOMG00000041091, gene:ENSEOMG00000042107, gene:ENSEOMG00000045505
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0008090, CQ.Regalona.r1.1BG0011240 ... CQ.Regalona.r1.2AG0012720, CQ.Regalona.r1.3AG0010390, CQ.Regalona.r1.4AG0011230, CQ.Regalona.r1.6BG0003030, CQ.Regalona.r1.6BG0003040, CQ.Regalona.r1.8BG0004570
Asteraceae	Flaveria trinervia	45	Ftri10G00597, Ftri10G26719, Ftri12G20029, Ftri12G24906 ... Ftri13G13396, Ftri15G06995, Ftri15G13549, Ftri15G13596, Ftri15G18758, Ftri15G19836, Ftri15G24621, Ftri15G30983, Ftri15G33916, Ftri16G25592, Ftri17G00492, Ftri17G01881, Ftri17G20055, Ftri17G23311, Ftri18G28794, Ftri1G04239, Ftri1G12666, Ftri1G15710, Ftri1G24258, Ftri2G09443, Ftri3G07942, Ftri3G12909, Ftri3G21570, Ftri4G08464, Ftri4G12050, Ftri4G13649, Ftri4G26984, Ftri4G27174, Ftri5G06904, Ftri5G09626, Ftri5G12053, Ftri5G16428, Ftri5G27392, Ftri6G05440, Ftri6G19733, Ftri8G21907, Ftri9G07673, Ftri9G13518, Ftri9G26070, Ftri9G26856, Ftri9G27788
Brassicaceae	Arabidopsis thaliana	2	AT2G13770.1, AT5G35490.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10029355m.g.v1.0, Thhalv10029366m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp5g15125.v2.2, Sp5g15613.v2.2
Brassicaceae	Brassica nigra	98	BniB01g008010.2N, BniB01g008440.2N, BniB01g014430.2N ... BniB01g020060.2N, BniB01g022670.2N, BniB01g024570.2N, BniB01g024620.2N, BniB01g026100.2N, BniB01g026220.2N, BniB01g044220.2N, BniB01g044260.2N, BniB01g047360.2N, BniB01g047770.2N, BniB01g050490.2N, BniB01g055830.2N, BniB02g017170.2N, BniB02g018650.2N, BniB02g019110.2N, BniB02g022340.2N, BniB02g022720.2N, BniB02g025570.2N, BniB02g026550.2N, BniB02g029590.2N, BniB02g029990.2N, BniB02g031740.2N, BniB02g038430.2N, BniB02g041490.2N, BniB02g046700.2N, BniB02g047910.2N, BniB03g025690.2N, BniB03g027500.2N, BniB03g034090.2N, BniB03g038100.2N, BniB03g041280.2N, BniB03g041990.2N, BniB03g055910.2N, BniB04g021560.2N, BniB04g033420.2N, BniB04g035240.2N, BniB04g035320.2N, BniB04g035560.2N, BniB04g037050.2N, BniB04g038500.2N, BniB04g043260.2N, BniB04g043900.2N, BniB04g043940.2N, BniB04g058790.2N, BniB04g064300.2N, BniB05g006700.2N, BniB05g035250.2N, BniB05g036260.2N, BniB05g037790.2N, BniB05g043180.2N, BniB05g047170.2N, BniB05g058670.2N, BniB05g063580.2N, BniB05g063750.2N, BniB05g063800.2N, BniB05g063970.2N, BniB05g066560.2N, BniB05g070310.2N, BniB05g071580.2N, BniB05g072240.2N, BniB05g074950.2N, BniB05g075650.2N, BniB06g006050.2N, BniB06g016120.2N, BniB06g016130.2N, BniB06g017240.2N, BniB06g022480.2N, BniB06g026720.2N, BniB06g042710.2N, BniB06g043520.2N, BniB06g044450.2N, BniB06g045710.2N, BniB06g050480.2N, BniB06g051560.2N, BniB06g055620.2N, BniB07g010830.2N, BniB07g012350.2N, BniB07g015730.2N, BniB07g018300.2N, BniB07g031320.2N, BniB07g032920.2N, BniB07g037740.2N, BniB07g040430.2N, BniB08g016110.2N, BniB08g022060.2N, BniB08g023670.2N, BniB08g023680.2N, BniB08g030860.2N, BniB08g034340.2N, BniB08g041230.2N, BniB08g042970.2N, BniB08g045480.2N, BniB08g058160.2N, BniB08g064680.2N, BniB08g076190.2N
Plantaginaceae	Plantago ovata	13	Pov_00001907, Pov_00004169, Pov_00007489, Pov_00009824 ... Pov_00010762, Pov_00011271, Pov_00015903, Pov_00017312, Pov_00019033, Pov_00030062, Pov_00036712, Pov_00038159, Pov_00038367
Plumbaginaceae	Limonium bicolor	1	Lb4G24791
Poaceae	Echinochloa crus-galli	58	AH01.2602, AH01.4600, AH01.4847, AH02.2871, AH02.853 ... AH03.1029, AH03.1341, AH03.2886, AH03.3034, AH03.576, AH04.836, AH05.1484, AH05.3125, AH06.1317, AH06.2004, AH06.2521, AH07.1745, AH07.2490, AH07.531, AH09.994, BH01.4568, BH01.4688, BH02.1260, BH03.1207, BH03.1277, BH03.1649, BH03.3471, BH04.372, BH04.603, BH04.632, BH04.634, BH04.636, BH06.1505, BH07.1482, BH07.769, CH01.1672, CH01.3094, CH01.3095, CH01.3310, CH01.4406, CH01.5265, CH02.2737, CH03.1346, CH03.4193, CH04.1660, CH04.2655, CH04.317, CH05.2854, CH06.246, CH07.1304, CH07.1874, CH07.2572, CH07.2694, CH08.1650, CH08.851, CH09.2888, CH09.514, CH09.642
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_4BG0334010, gene-QOZ80_6BG0474060
Poaceae	Lolium multiflorum	101	gene-QYE76_000413, gene-QYE76_000879, gene-QYE76_001451 ... gene-QYE76_001908, gene-QYE76_001978, gene-QYE76_002828, gene-QYE76_003038, gene-QYE76_004261, gene-QYE76_005393, gene-QYE76_005754, gene-QYE76_005769, gene-QYE76_007366, gene-QYE76_007561, gene-QYE76_007994, gene-QYE76_011931, gene-QYE76_012252, gene-QYE76_014179, gene-QYE76_014293, gene-QYE76_014663, gene-QYE76_015072, gene-QYE76_015444, gene-QYE76_016552, gene-QYE76_017276, gene-QYE76_018223, gene-QYE76_018224, gene-QYE76_018398, gene-QYE76_018452, gene-QYE76_020031, gene-QYE76_020423, gene-QYE76_020452, gene-QYE76_020860, gene-QYE76_021343, gene-QYE76_021487, gene-QYE76_022163, gene-QYE76_022400, gene-QYE76_022859, gene-QYE76_023688, gene-QYE76_023974, gene-QYE76_024080, gene-QYE76_025308, gene-QYE76_026450, gene-QYE76_029569, gene-QYE76_030187, gene-QYE76_031972, gene-QYE76_031988, gene-QYE76_032040, gene-QYE76_033113, gene-QYE76_033989, gene-QYE76_035160, gene-QYE76_036159, gene-QYE76_036178, gene-QYE76_037147, gene-QYE76_040576, gene-QYE76_041792, gene-QYE76_041972, gene-QYE76_042790, gene-QYE76_042999, gene-QYE76_043745, gene-QYE76_044222, gene-QYE76_044471, gene-QYE76_045419, gene-QYE76_046190, gene-QYE76_048237, gene-QYE76_048430, gene-QYE76_048777, gene-QYE76_049240, gene-QYE76_049433, gene-QYE76_050170, gene-QYE76_051460, gene-QYE76_051951, gene-QYE76_052337, gene-QYE76_053627, gene-QYE76_053863, gene-QYE76_054104, gene-QYE76_054245, gene-QYE76_054458, gene-QYE76_054892, gene-QYE76_057494, gene-QYE76_058073, gene-QYE76_058659, gene-QYE76_059024, gene-QYE76_061824, gene-QYE76_062602, gene-QYE76_063035, gene-QYE76_063150, gene-QYE76_063167, gene-QYE76_063676, gene-QYE76_063966, gene-QYE76_064840, gene-QYE76_066163, gene-QYE76_066316, gene-QYE76_066368, gene-QYE76_066688, gene-QYE76_067064, gene-QYE76_068747, gene-QYE76_068816, gene-QYE76_070419, gene-QYE76_070547, gene-QYE76_070986, gene-QYE76_071436, gene-QYE76_071835
Poaceae	Oryza coarctata	3	Oco01G005280, Oco09G008270, Oco12G013990
Poaceae	Oryza sativa	1	LOC_Os05g09290.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G135400, gene-BS78_02G191200, gene-BS78_K124400 ... gene-BS78_03G390500, gene-BS78_05G079900, gene-BS78_10G170100
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0405064, Pt_Chr0500813, Pt_Chr0603908
Poaceae	Sporobolus alterniflorus	32	Chr01G011930, Chr01G038250, Chr02G023250, Chr03G007700 ... Chr03G019430, Chr04G008500, Chr04G016780, Chr04G026600, Chr06G008770, Chr06G025090, Chr06G032360, Chr08G010290, Chr10G002020, Chr10G002930, Chr10G002940, Chr10G006850, Chr10G006860, Chr10G008930, Chr10G010930, Chr12G028820, Chr13G011540, Chr13G015040, Chr13G016860, Chr13G017920, Chr13G017930, Chr15G015930, Chr17G012510, Chr19G010460, Chr22G015900, Chr23G013570, Chr24G010790, Chr31G003480
Poaceae	Thinopyrum elongatum	4	Tel1E01G721200, Telscf39201G000300, Telscf39201G000400 ... Telscf55501G000100
Poaceae	Triticum dicoccoides	33	gene_TRIDC1AG020000, gene_TRIDC1AG031370 ... gene_TRIDC1BG064730, gene_TRIDC2AG004760, gene_TRIDC2AG011880, gene_TRIDC2AG032600, gene_TRIDC2BG060390, gene_TRIDC2BG072730, gene_TRIDC2BG082990, gene_TRIDC3AG031740, gene_TRIDC3AG060520, gene_TRIDC3BG017410, gene_TRIDC3BG041950, gene_TRIDC3BG071650, gene_TRIDC4AG035430, gene_TRIDC4AG048400, gene_TRIDC4BG000810, gene_TRIDC4BG028600, gene_TRIDC4BG031700, gene_TRIDC5AG013060, gene_TRIDC5AG066570, gene_TRIDC5BG040310, gene_TRIDC5BG053650, gene_TRIDC5BG064590, gene_TRIDC5BG077900, gene_TRIDC6AG033530, gene_TRIDC6AG039440, gene_TRIDC6AG039750, gene_TRIDC6AG057070, gene_TRIDC7AG031000, gene_TRIDC7AG038330, gene_TRIDC7BG008290, gene_TRIDC7BG074110
Poaceae	Zea mays	1	Zm00001eb412390_P001
Poaceae	Zoysia japonica	1	nbis-gene-41975
Poaceae	Zoysia macrostachya	1	Zma_g3435
Portulacaceae	Portulaca oleracea	2	evm.TU.LG02.2559, evm.TU.LG15.42
Solanaceae	Lycium barbarum	13	gene-LOC132606769, gene-LOC132608125, gene-LOC132609208 ... gene-LOC132613242, gene-LOC132619574, gene-LOC132624563, gene-LOC132631128, gene-LOC132631219, gene-LOC132634159, gene-LOC132636734, gene-LOC132639600, gene-LOC132644548, gene-LOC132644551
Solanaceae	Solanum chilense	3	SOLCI001542700, SOLCI004498500, SOLCI006849400
Tamaricaceae	Reaumuria soongarica	1	STRG.10526_chr07_+
Tamaricaceae	Tamarix chinensis	1	TC02G2363