Basic Information
Locus ID:
gene-QYE76_062435
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 95786828 | 95791042 | - | gene-QYE76_062435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 65,930.29 Da | 58.53 | 66.76 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 363 | 386 | 1.7E-5 | IPR001876 |
| Pfam | PF10497 | Zinc-finger domain of monoamine-oxidase A repressor R1 | 4 | 57 | 4.3E-9 | IPR018866 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 319 | 344 | 1.3E-7 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 316 | 343 | 3.06E-5 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 391 | 426 | 2.04E-5 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 358 | 388 | 2.67E-5 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 312 | 347 | 3.0E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 392 | 426 | 1.5E-8 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 355 | 391 | 4.4E-12 | - |
| SMART | SM00547 | zf_4 | 365 | 389 | 1.7E-6 | IPR001876 |
| SMART | SM00547 | zf_4 | 398 | 422 | 0.026 | IPR001876 |
| SMART | SM00547 | zf_4 | 321 | 345 | 2.0E-7 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 396 | 425 | 9.224238 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 319 | 348 | 9.913063 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 363 | 392 | 9.359745 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 367 | 386 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 323 | 342 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 400 | 419 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 491 | - | - |
| Coils | Coil | Coil | 276 | 296 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein. | 0 |
| RefSeq | XP_047085803.1 | uncharacterized protein LOC124697224 [Lolium rigidum] | 0 |
| TrEMBL | A0A3B6IK24 | Zinc finger protein VAR3, chloroplastic OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology