Basic Information
Locus ID:
gene-QYE76_062277
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 90264080 | 90268477 | + | gene-QYE76_062277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 114,649.87 Da | 47.98 | 80.49 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 895 | 1031 | 5.46582E-75 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 564 | 807 | 2.1E-70 | IPR013103 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 99 | 233 | 1.5E-18 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 563 | 1001 | 5.69E-41 | IPR043502 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 303 | 316 | 8.515406 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 485 | - | - |
| Coils | Coil | Coil | 222 | 242 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_021319227.1 | uncharacterized protein LOC110436454 [Sorghum bicolor] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | Q94LQ7 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g40800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |