Basic Information
Locus ID:
gene-QYE76_062186
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Reverse transcriptase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 86662771 | 86663879 | - | gene-QYE76_062186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 24,797.97 Da | 20.97 | 91.92 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 85 | 204 | 5.50692E-21 | IPR044730 |
| Pfam | PF13456 | Reverse transcriptase-like | 86 | 205 | 1.4E-16 | IPR002156 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 82 | 209 | 5.82E-8 | IPR012337 |
| SUPERFAMILY | SSF50630 | Acid proteases | 3 | 65 | 6.1E-6 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1 | 72 | 2.0E-7 | IPR021109 |
| Gene3D | G3DSA:3.30.420.10 | - | 80 | 208 | 3.6E-13 | IPR036397 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021303237.1 | uncharacterized protein LOC110430246 [Sorghum bicolor] | 0 |
| TrEMBL | N1QR67 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl49718 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00031856 |
| Poaceae | Echinochloa crus-galli | 1 | CH04.2023 |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.1HG0085260.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 36 | gene-QYE76_000856, gene-QYE76_009072, gene-QYE76_009957 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G280500, gene-BS78_06G115900 ... |
| Poaceae | Puccinellia tenuiflora | 16 | Pt_Chr0101004, Pt_Chr0102007, Pt_Chr0105198, Pt_Chr0202515 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G023650 |
| Poaceae | Thinopyrum elongatum | 3 | Tel4E01G032600, Tel4E01G032700, Tel6E01G605700 |
| Poaceae | Triticum dicoccoides | 12 | gene_TRIDC1AG017790, gene_TRIDC1BG021710 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS7B02G061000.1.cds1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25144 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g00920 |