Basic Information
Locus ID:
gene-QYE76_062050
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 82556346 | 82567458 | + | gene-QYE76_062050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.79 | 112,267.80 Da | 53.85 | 75.80 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 672 | 883 | 1.1E-58 | IPR013103 |
| Pfam | PF02428 | Potato type II proteinase inhibitor family | 1012 | 1058 | 9.2E-10 | IPR003465 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 261 | 394 | 6.0E-19 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 670 | 979 | 6.14E-25 | IPR043502 |
| SUPERFAMILY | SSF100897 | Plant proteinase inhibitors | 1006 | 1061 | 5.76E-13 | - |
| Gene3D | G3DSA:3.30.60.30 | - | 1011 | 1061 | 9.2E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051211614.1 | uncharacterized protein LOC127329110 [Lolium perenne] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9FW32 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19227 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 28 | gene-QYE76_000512, gene-QYE76_000878, gene-QYE76_001935 ... |