Basic Information
Locus ID:
gene-QYE76_061885
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 77908220 | 77916743 | - | gene-QYE76_061885 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 132,027.52 Da | 51.35 | 68.59 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 1079 | 1140 | 0.00624953 | - |
| CDD | cd15539 | PHD1_AIRE | 886 | 925 | 5.05222E-17 | - |
| Pfam | PF00628 | PHD-finger | 886 | 928 | 3.4E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 806 | 855 | 2.6E-12 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 872 | 930 | 1.33E-13 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1072 | 1162 | 4.8E-6 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 873 | 942 | 2.0E-17 | IPR013083 |
| SMART | SM00249 | PHD_3 | 885 | 926 | 1.4E-11 | IPR001965 |
| SMART | SM00249 | PHD_3 | 927 | 985 | 7.8 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1022 | 1177 | 9.961732 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 883 | 928 | 10.0418 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1206 | 1223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1184 | 1223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 713 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 694 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 746 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G36740.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. | 0 |
| RefSeq | XP_047092516.1 | uncharacterized protein LOC124704310 [Lolium rigidum] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KLV0 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology