halophFGD

Basic Information

Locus ID: gene-QYE76_061548

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Short Name: SDH1-1

Description: Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	67400345	67404464	+	gene-QYE76_061548

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.45	55,958.28 Da	42.06	65.14	-0.63

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02992	Transposase family tnp2	459	501	1.1E-10	IPR004242
Pfam	PF00890	FAD binding domain	15	157	1.9E-39	IPR003953
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	5	142	1.12E-35	IPR036188
Gene3D	G3DSA:3.50.50.60	-	2	188	5.7E-64	IPR036188
ProSitePatterns	PS00504	Fumarate reductase / succinate dehydrogenase FAD-binding site.	49	58	-	IPR003952
MobiDBLite	mobidb-lite	consensus disorder prediction	222	249	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	222	268	-	-

Gene Ontology

Molecular Function:

GO:0016491 (oxidoreductase activity)

KEGG Pathway

KO Term:

K00234 (succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1])

Pathway:

ko00020 (Citrate cycle (TCA cycle)) map00020 (Citrate cycle (TCA cycle)) ko00190 (Oxidative phosphorylation) map00190 (Oxidative phosphorylation) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01200 (Carbon metabolism) map01200 (Carbon metabolism)

Module:

M00009 (Citrate cycle (TCA cycle, Krebs cycle)) M00011 (Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate) M00148 (Succinate dehydrogenase (ubiquinone))

Reaction:

R02164 (Quinone + Succinate <=> Hydroquinone + Fumarate)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G66760.1	succinate dehydrogenase 1-1. One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.
RefSeq	XP_051202093.1	uncharacterized protein LOC127315663 [Lolium perenne]
Swiss-Prot	Q6ZDY8	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH1 PE=1 SV=1
TrEMBL	A0A453LWI5	FAD_binding_2 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	112	gene-QYE76_001277, gene-QYE76_001352, gene-QYE76_001721 ... gene-QYE76_002495, gene-QYE76_003541, gene-QYE76_004443, gene-QYE76_004928, gene-QYE76_004941, gene-QYE76_005807, gene-QYE76_005830, gene-QYE76_005831, gene-QYE76_007803, gene-QYE76_008013, gene-QYE76_009230, gene-QYE76_010006, gene-QYE76_011087, gene-QYE76_011088, gene-QYE76_015340, gene-QYE76_015803, gene-QYE76_015804, gene-QYE76_016532, gene-QYE76_017682, gene-QYE76_017873, gene-QYE76_017875, gene-QYE76_018904, gene-QYE76_020250, gene-QYE76_021804, gene-QYE76_021865, gene-QYE76_023256, gene-QYE76_023756, gene-QYE76_023757, gene-QYE76_025100, gene-QYE76_025581, gene-QYE76_025582, gene-QYE76_026848, gene-QYE76_027131, gene-QYE76_027180, gene-QYE76_027298, gene-QYE76_028784, gene-QYE76_029705, gene-QYE76_030814, gene-QYE76_031025, gene-QYE76_031026, gene-QYE76_032944, gene-QYE76_033725, gene-QYE76_033726, gene-QYE76_035656, gene-QYE76_036097, gene-QYE76_037485, gene-QYE76_037940, gene-QYE76_037941, gene-QYE76_038016, gene-QYE76_039089, gene-QYE76_039328, gene-QYE76_040381, gene-QYE76_040873, gene-QYE76_040944, gene-QYE76_041380, gene-QYE76_041616, gene-QYE76_042404, gene-QYE76_042975, gene-QYE76_043639, gene-QYE76_043915, gene-QYE76_043916, gene-QYE76_044922, gene-QYE76_045526, gene-QYE76_046120, gene-QYE76_046263, gene-QYE76_046264, gene-QYE76_047074, gene-QYE76_047159, gene-QYE76_047736, gene-QYE76_048079, gene-QYE76_048135, gene-QYE76_048136, gene-QYE76_052370, gene-QYE76_052992, gene-QYE76_053032, gene-QYE76_053923, gene-QYE76_054108, gene-QYE76_055394, gene-QYE76_056823, gene-QYE76_057935, gene-QYE76_058184, gene-QYE76_058195, gene-QYE76_059337, gene-QYE76_059369, gene-QYE76_061050, gene-QYE76_061051, gene-QYE76_061199, gene-QYE76_061548, gene-QYE76_062122, gene-QYE76_062123, gene-QYE76_062506, gene-QYE76_062507, gene-QYE76_064177, gene-QYE76_064721, gene-QYE76_065021, gene-QYE76_066602, gene-QYE76_066729, gene-QYE76_066913, gene-QYE76_068003, gene-QYE76_068108, gene-QYE76_068932, gene-QYE76_069271, gene-QYE76_070149, gene-QYE76_070150, gene-QYE76_070245, gene-QYE76_070496, gene-QYE76_071305, gene-QYE76_071506, gene-QYE76_071866