halophFGD

Basic Information

Locus ID: gene-QYE76_061320

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Short Name: ARP7

Description: Belongs to the actin family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	60334258	60358189	-	gene-QYE76_061320

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.57	97,071.37 Da	42.54	81.07	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00012	NBD_sugar-kinase_HSP70_actin	4	167	2.57606E-15	-
Pfam	PF00022	Actin	2	354	2.2E-63	IPR004000
Pfam	PF07727	Reverse transcriptase (RNA-dependent DNA polymerase)	747	871	8.1E-40	IPR013103
Pfam	PF00098	Zinc knuckle	506	521	2.1E-7	IPR001878
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	495	529	1.12E-8	IPR036875
SUPERFAMILY	SSF53067	Actin-like ATPase domain	2	139	5.5E-26	IPR043129
SUPERFAMILY	SSF53067	Actin-like ATPase domain	132	355	1.81E-50	IPR043129
Gene3D	G3DSA:3.30.420.40	-	124	325	4.6E-80	-
Gene3D	G3DSA:3.90.640.10	Actin; Chain A, domain 4	166	253	4.6E-80	-
Gene3D	G3DSA:3.30.420.40	-	4	354	4.6E-80	-
Gene3D	G3DSA:4.10.60.10	-	498	531	5.2E-8	-
SMART	SM00268	actin_3	1	369	9.7E-52	IPR004000
SMART	SM00343	c2hcfinal6	505	521	1.6E-5	IPR001878
ProSiteProfiles	PS50158	Zinc finger CCHC-type profile.	506	521	11.119688	IPR001878
PRINTS	PR00190	Actin signature	126	145	1.9E-11	IPR004000
PRINTS	PR00190	Actin signature	23	32	1.9E-11	IPR004000
PRINTS	PR00190	Actin signature	218	234	1.9E-11	IPR004000
PRINTS	PR00190	Actin signature	101	114	1.9E-11	IPR004000
MobiDBLite	mobidb-lite	consensus disorder prediction	680	698	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	671	698	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K16615 (actin-related protein 7, plant)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G60830.1	actin-related protein 7. Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.
RefSeq	XP_047092669.1	actin-related protein 7 [Lolium rigidum]
Swiss-Prot	A2XMK6	Actin-related protein 7 OS=Oryza sativa subsp. indica OX=39946 GN=ARP7 PE=2 SV=2
TrEMBL	A0A3B6LU94	Actin-related protein 7 OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg49723
Asteraceae	Flaveria trinervia	3	Ftri16G33087, Ftri3G20908, Ftri8G30898
Poaceae	Lolium multiflorum	72	gene-QYE76_001045, gene-QYE76_002921, gene-QYE76_003125 ... gene-QYE76_003340, gene-QYE76_003915, gene-QYE76_003917, gene-QYE76_004923, gene-QYE76_005585, gene-QYE76_006139, gene-QYE76_006605, gene-QYE76_007873, gene-QYE76_008436, gene-QYE76_010084, gene-QYE76_011520, gene-QYE76_011953, gene-QYE76_012207, gene-QYE76_013020, gene-QYE76_013261, gene-QYE76_013644, gene-QYE76_014200, gene-QYE76_015017, gene-QYE76_022095, gene-QYE76_024919, gene-QYE76_025426, gene-QYE76_026897, gene-QYE76_027380, gene-QYE76_030158, gene-QYE76_030810, gene-QYE76_031198, gene-QYE76_031694, gene-QYE76_033544, gene-QYE76_034396, gene-QYE76_036129, gene-QYE76_036893, gene-QYE76_037055, gene-QYE76_037924, gene-QYE76_038468, gene-QYE76_039022, gene-QYE76_039134, gene-QYE76_043377, gene-QYE76_044275, gene-QYE76_048695, gene-QYE76_048902, gene-QYE76_049180, gene-QYE76_049287, gene-QYE76_049337, gene-QYE76_049648, gene-QYE76_050084, gene-QYE76_050146, gene-QYE76_050801, gene-QYE76_053034, gene-QYE76_057171, gene-QYE76_057271, gene-QYE76_057605, gene-QYE76_058294, gene-QYE76_058619, gene-QYE76_059435, gene-QYE76_060735, gene-QYE76_061320, gene-QYE76_061490, gene-QYE76_062413, gene-QYE76_063597, gene-QYE76_064028, gene-QYE76_064528, gene-QYE76_066514, gene-QYE76_066629, gene-QYE76_067159, gene-QYE76_067840, gene-QYE76_069241, gene-QYE76_069442, gene-QYE76_069523, gene-QYE76_069648