halophFGD

Basic Information

Locus ID: gene-QYE76_061237

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	58135142	58139776	+	gene-QYE76_061237

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.77	29,888.10 Da	43.02	67.18	-0.48

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd10017	B3_DNA	183	255	1.35067E-7	IPR003340
Pfam	PF00651	BTB/POZ domain	55	109	1.0E-11	IPR000210
SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	179	255	1.47E-8	IPR015300
SUPERFAMILY	SSF54695	POZ domain	56	112	1.31E-13	IPR011333
Gene3D	G3DSA:2.40.330.10	-	209	258	8.5E-8	IPR015300
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	45	139	3.5E-16	IPR011333
ProSiteProfiles	PS50097	BTB domain profile.	57	105	11.026551	IPR000210
MobiDBLite	mobidb-lite	consensus disorder prediction	136	176	-	-

Gene Ontology

Molecular Function:

GO:0003677 (DNA binding) GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_051220589.1	B3 domain-containing protein Os03g0212300-like [Lolium perenne]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	I1IMY3	BTB domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g23767v3 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah010341
Poaceae	Lolium multiflorum	63	gene-QYE76_000417, gene-QYE76_000952, gene-QYE76_000953 ... gene-QYE76_004078, gene-QYE76_006370, gene-QYE76_006747, gene-QYE76_007190, gene-QYE76_007192, gene-QYE76_008031, gene-QYE76_008098, gene-QYE76_009674, gene-QYE76_010262, gene-QYE76_011455, gene-QYE76_011830, gene-QYE76_013081, gene-QYE76_013160, gene-QYE76_013879, gene-QYE76_015237, gene-QYE76_015599, gene-QYE76_015642, gene-QYE76_019639, gene-QYE76_021499, gene-QYE76_022696, gene-QYE76_023164, gene-QYE76_023353, gene-QYE76_024027, gene-QYE76_025298, gene-QYE76_026881, gene-QYE76_029418, gene-QYE76_032449, gene-QYE76_032773, gene-QYE76_032869, gene-QYE76_033465, gene-QYE76_035708, gene-QYE76_038587, gene-QYE76_038614, gene-QYE76_040300, gene-QYE76_040472, gene-QYE76_040956, gene-QYE76_041894, gene-QYE76_043162, gene-QYE76_043195, gene-QYE76_043460, gene-QYE76_043765, gene-QYE76_043936, gene-QYE76_048336, gene-QYE76_050540, gene-QYE76_052508, gene-QYE76_053572, gene-QYE76_054763, gene-QYE76_055454, gene-QYE76_056942, gene-QYE76_061052, gene-QYE76_061237, gene-QYE76_062043, gene-QYE76_063140, gene-QYE76_064469, gene-QYE76_065058, gene-QYE76_065119, gene-QYE76_067099, gene-QYE76_068004, gene-QYE76_069573, gene-QYE76_070249