Basic Information
Locus ID:
gene-QYE76_060903
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 48508130 | 48512378 | + | gene-QYE76_060903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 57,731.88 Da | 56.77 | 53.13 | -1.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 380 | 461 | 1.3E-16 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 478 | 509 | 5.1E-8 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 380 | 462 | 1.8E-23 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 330 | - | - |
| Coils | Coil | Coil | 386 | 406 | - | - |
| Coils | Coil | Coil | 414 | 443 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_047092895.1 | uncharacterized protein LOC124704669 [Lolium rigidum] | 0 |
| TrEMBL | I1GLR6 | PAPA-1 domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100842627 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology