Basic Information
Locus ID:
gene-QYE76_060686
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 42515285 | 42523512 | - | gene-QYE76_060686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 152,004.42 Da | 47.66 | 98.43 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00143 | PP2Cc | 1020 | 1320 | 5.59013E-52 | IPR001932 |
| Pfam | PF18052 | Rx N-terminal domain | 25 | 116 | 5.2E-9 | IPR041118 |
| Pfam | PF00481 | Protein phosphatase 2C | 1045 | 1285 | 4.3E-30 | IPR001932 |
| Pfam | PF00931 | NB-ARC domain | 199 | 440 | 8.9E-34 | IPR002182 |
| SUPERFAMILY | SSF81606 | PP2C-like | 1025 | 1321 | 1.15E-48 | IPR036457 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 191 | 459 | 2.64E-50 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 582 | 837 | 2.28E-16 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 353 | 445 | 3.1E-7 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 179 | 345 | 1.3E-29 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 24 | 135 | 8.9E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 539 | 884 | 7.3E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 446 | 529 | 3.2E-8 | IPR036388 |
| Gene3D | G3DSA:3.60.40.10 | - | 1011 | 1328 | 4.2E-80 | IPR036457 |
| SMART | SM00332 | PP2C_4 | 1013 | 1318 | 1.6E-54 | IPR001932 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 1019 | 1320 | 37.493576 | IPR001932 |
| PRINTS | PR00364 | Disease resistance protein signature | 220 | 235 | 9.2E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 292 | 306 | 9.2E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 391 | 405 | 9.2E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 662 | 678 | 9.2E-11 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66080.1 | Protein phosphatase 2C family protein. | 0 |
| RefSeq | XP_044391263.1 | disease resistance protein RGA5-like [Triticum aestivum] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | F2ELW5 | protein-serine/threonine phosphatase (Fragment) OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology