halophFGD

Basic Information

Locus ID: gene-QYE76_060651

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: MULE transposase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	42023415	42033331	+	gene-QYE76_060651

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.52	112,431.84 Da	46.08	63.30	-0.68

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06222	RNase_H_like	93	191	4.13241E-23	IPR044730
Pfam	PF13456	Reverse transcriptase-like	94	171	4.9E-13	IPR002156
Pfam	PF08244	Glycosyl hydrolases family 32 C terminal	196	263	2.2E-5	IPR013189
Pfam	PF03108	MuDR family transposase	365	428	2.6E-8	IPR004332
SUPERFAMILY	SSF53098	Ribonuclease H-like	90	196	4.3E-12	IPR012337
Gene3D	G3DSA:2.60.120.560	-	196	322	2.2E-20	-
Gene3D	G3DSA:3.30.420.10	-	91	195	2.0E-11	IPR036397
MobiDBLite	mobidb-lite	consensus disorder prediction	897	923	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	822	847	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	285	342	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	904	923	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	946	991	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	786	871	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	314	331	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	973	991	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	807	821	-	-

Gene Ontology

Molecular Function:

Best hit

Source	Best Hit ID	Description
TAIR	AT2G13980.1	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.
RefSeq	XP_051229256.1	uncharacterized protein LOC127347069 [Lolium perenne]
Swiss-Prot	Q01IS7	Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Oryza sativa subsp. indica OX=39946 GN=CIN2 PE=2 SV=2
TrEMBL	A0A8R7JTY0	PMD domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	40	gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ... gene-QYE76_007459, gene-QYE76_007460, gene-QYE76_007678, gene-QYE76_008699, gene-QYE76_009652, gene-QYE76_010827, gene-QYE76_011172, gene-QYE76_016027, gene-QYE76_017898, gene-QYE76_024787, gene-QYE76_026183, gene-QYE76_031125, gene-QYE76_031920, gene-QYE76_031925, gene-QYE76_032983, gene-QYE76_034251, gene-QYE76_035075, gene-QYE76_036400, gene-QYE76_037581, gene-QYE76_037987, gene-QYE76_037998, gene-QYE76_037999, gene-QYE76_040991, gene-QYE76_041373, gene-QYE76_041718, gene-QYE76_045280, gene-QYE76_047443, gene-QYE76_049160, gene-QYE76_051154, gene-QYE76_054532, gene-QYE76_058190, gene-QYE76_059907, gene-QYE76_060651, gene-QYE76_062629, gene-QYE76_067714, gene-QYE76_069777, gene-QYE76_071208
Poaceae	Oryza coarctata	1	Oco04G018420
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG047900