Basic Information
Locus ID:
gene-QYE76_060595
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 40908083 | 40918690 | - | gene-QYE76_060595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 124,281.76 Da | 49.50 | 74.15 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 974 | 1110 | 2.55788E-75 | - |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 45 | 84 | 9.0E-7 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 110 | 222 | 4.1E-10 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 644 | 886 | 2.7E-69 | IPR013103 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 643 | 1080 | 4.89E-39 | IPR043502 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 573 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_035816648.1 | uncharacterized protein LOC115072894 isoform X1 [Zea mays] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | Q94LQ7 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g40800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |