Basic Information
Locus ID:
gene-QYE76_060385
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 35403987 | 35404679 | - | gene-QYE76_060385 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 25,524.92 Da | 51.95 | 83.44 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 29 | 158 | 5.9499E-27 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 163 | 203 | 7.61E-5 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 164 | 8.67E-31 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 160 | 4.3E-27 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 207 | 5.8E-6 | IPR011333 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 158 | 19.138037 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21010.1 | BTB-POZ and MATH domain 5. | 0 |
| RefSeq | XP_051228856.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q1EBV6 | BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z489 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0568820, gene-QOZ80_9AG0683000 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0088540.1.CDS1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_060368, gene-QYE76_060374, gene-QYE76_060376 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G653400, Tel1E01G659000 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC1AG058850, gene_TRIDC1AG058870 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G428200.1.cds1, TraesCS1B02G428300.1.cds1 ... |