Basic Information
Locus ID:
gene-QYE76_060257
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 31430349 | 31431128 | - | gene-QYE76_060257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 28,083.17 Da | 59.01 | 55.13 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 211 | 248 | 3.71244E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 210 | 254 | 7.5E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 210 | 255 | 5.89E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 190 | 259 | 1.3E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 211 | 248 | 7.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 211 | 249 | 10.881201 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 202 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_051230282.1 | uncharacterized protein LOC127348237 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7TWE1 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology