Basic Information
Locus ID:
gene-QYE76_059991
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 23151248 | 23168618 | + | gene-QYE76_059991 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 191,283.38 Da | 39.55 | 91.19 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 463 | 726 | 3.9E-36 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 1381 | 1656 | 8.7E-48 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 795 | 1010 | 1.2E-43 | IPR000719 |
| Pfam | PF18098 | 26S proteasome regulatory subunit RPN5 C-terminal domain | 403 | 435 | 1.7E-10 | IPR040896 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 1209 | 1314 | 2.2E-23 | IPR000535 |
| Pfam | PF01399 | PCI domain | 288 | 397 | 1.5E-17 | IPR000717 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 1049 | 1145 | 3.8E-24 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 442 | 728 | 4.45E-53 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 1198 | 1337 | 1.81E-34 | IPR008962 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 330 | 406 | 7.89E-17 | IPR036390 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1362 | 1659 | 1.75E-68 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 1040 | 1173 | 3.66E-32 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 774 | 1029 | 2.02E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 544 | 736 | 1.5E-38 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1042 | 1173 | 1.3E-36 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 760 | 869 | 2.5E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1342 | 1452 | 1.9E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 889 | 1041 | 5.8E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 530 | 9.9E-19 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 328 | 405 | 9.5E-17 | IPR036388 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1202 | 1332 | 2.7E-36 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1470 | 1668 | 5.4E-49 | - |
| SMART | SM00220 | serkin_6 | 1378 | 1659 | 3.1E-33 | IPR000719 |
| SMART | SM00088 | PINT_4 | 330 | 416 | 3.7E-16 | IPR000717 |
| SMART | SM00220 | serkin_6 | 461 | 736 | 5.3E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 794 | 1069 | 2.2E-29 | IPR000719 |
| SMART | SM00753 | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 330 | 416 | 3.7E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 794 | 1082 | 36.272804 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 1048 | 1170 | 25.859221 | IPR000535 |
| ProSiteProfiles | PS50250 | PCI domain profile. | 230 | 401 | 20.97241 | IPR000717 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1378 | 1662 | 37.318718 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 1208 | 1328 | 26.187069 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 736 | 31.509645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 800 | 826 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 467 | 488 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1513 | 1525 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 932 | 944 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1384 | 1407 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1335 | 1352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1330 | 1352 | - | - |
| Coils | Coil | Coil | 117 | 137 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09900.1 | 26S proteasome regulatory subunit, putative (RPN5). Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects. | 0 |
| RefSeq | XP_051177033.1 | pollen receptor-like kinase 1 [Lolium perenne] | 0 |
| Q9FIB6 | 26S proteasome non-ATPase regulatory subunit 12 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN5A PE=1 SV=1 | 0 | |
| TrEMBL | I1GKU4 | PCI domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100827039 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_059991.