Basic Information
Locus ID:
gene-QYE76_059598
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11006231 | 11014292 | - | gene-QYE76_059598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 161,088.59 Da | 43.72 | 90.34 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 981 | 1007 | 2.41872E-6 | - |
| CDD | cd14066 | STKc_IRAK | 1111 | 1379 | 9.4756E-82 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 550 | 600 | 8.1E-8 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1107 | 1373 | 6.0E-45 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 821 | 878 | 2.3E-11 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1085 | 1376 | 2.02E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 137 | 434 | 4.0E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 441 | 6.2E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1181 | 1396 | 1.7E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1072 | 1180 | 6.6E-31 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 928 | 1013 | 1.1E-8 | - |
| SMART | SM00220 | serkin_6 | 1105 | 1379 | 1.7E-33 | IPR000719 |
| SMART | SM00179 | egfca_6 | 981 | 1019 | 0.0015 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1105 | 1379 | 37.064308 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1111 | 1134 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1227 | 1239 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 981 | 1004 | - | IPR018097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1381 | 1408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1381 | 1395 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_047071572.1 | wall-associated receptor kinase 4-like isoform X1 [Lolium rigidum] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LXJ7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH01.3275, BH01.3663, CH01.3846, CH01.3847, CH02.1873 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531690.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_059598, gene-QYE76_060264 |
| Poaceae | Oryza coarctata | 3 | Oco01G010200, Oco05G028540, Oco06G029580 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62430.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G320700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0105226, Pt_Chr0106279 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G818100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052310, gene_TRIDC5BG078330 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G347600.1, TraesCS5B02G526000.1 ... |