Basic Information
Locus ID:
gene-QYE76_059489
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6865036 | 6873535 | - | gene-QYE76_059489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 93,411.51 Da | 49.37 | 74.04 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 166 | 494 | 2.06021E-171 | - |
| CDD | cd00121 | MATH | 25 | 141 | 1.30253E-34 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 593 | 712 | 2.2E-30 | IPR024729 |
| Pfam | PF00917 | MATH domain | 30 | 150 | 4.2E-20 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 168 | 489 | 5.0E-47 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 163 | 519 | 8.24E-97 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 21 | 156 | 1.32E-39 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 165 | 493 | 5.5E-90 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 164 | 1.3E-50 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 653 | 733 | 2.7E-19 | - |
| SMART | SM00061 | math_3 | 25 | 129 | 3.3E-21 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 168 | 492 | 40.289238 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 23 | 148 | 37.727066 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 169 | 184 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 408 | 425 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| Coils | Coil | Coil | 508 | 528 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_047067621.1 | ubiquitin C-terminal hydrolase 12-like isoform X1 [Lolium rigidum] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453K4A9 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology