Basic Information
Locus ID:
gene-QYE76_059141
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
rRNA N-glycosidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_647 | 117788 | 118684 | + | gene-QYE76_059141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 32,709.99 Da | 28.02 | 75.34 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 20 | 215 | 2.6E-61 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 16 | 219 | 4.58E-50 | IPR036041 |
| Gene3D | G3DSA:4.10.470.10 | Ricin (A Subunit), domain 2 | 173 | 297 | 3.6E-39 | IPR016139 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 172 | 2.0E-53 | IPR016138 |
| ProSitePatterns | PS00275 | Shiga/ricin ribosomal inactivating toxins active site signature. | 165 | 181 | - | IPR017988 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 21 | 34 | 1.7E-8 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 161 | 181 | 1.7E-8 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 71 | 86 | 1.7E-8 | IPR017989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 249 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051177456.1 | protein synthesis inhibitor II-like [Lolium perenne] | 0 |
| P04399 | Protein synthesis inhibitor II OS=Hordeum vulgare OX=4513 GN=RIP30A PE=1 SV=1 | 0 | |
| TrEMBL | M8BIX5 | rRNA N-glycosylase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology