Basic Information
Locus ID:
gene-QYE76_059051
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 363154745 | 363157643 | + | gene-QYE76_059051 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 51,947.91 Da | 47.86 | 72.43 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 193 | 452 | 6.97851E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 287 | 322 | 1.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 327 | 367 | 7.0E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 416 | 452 | 1.1E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 155 | 453 | 1.6E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 113 | 454 | 2.3E-120 | IPR015943 |
| SMART | SM00320 | WD40_4 | 413 | 452 | 1.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 155 | 196 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 283 | 322 | 7.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 325 | 367 | 1.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 242 | 279 | 7.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 370 | 410 | 270.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 199 | 239 | 0.27 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 290 | 331 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 420 | 453 | 11.523771 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 420 | 453 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 332 | 376 | 8.737287 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 290 | 322 | 11.075592 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 439 | 453 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 52 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_051228748.1 | protein FIZZY-RELATED 3 [Lolium perenne] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FZ39 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology