Basic Information
Locus ID:
gene-QYE76_058898
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 358466207 | 358470677 | + | gene-QYE76_058898 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 44,970.94 Da | 30.69 | 83.36 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 263 | 417 | 1.12879E-76 | - |
| Pfam | PF00190 | Cupin | 119 | 218 | 1.9E-7 | IPR006045 |
| Pfam | PF00190 | Cupin | 261 | 403 | 3.3E-21 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 124 | 409 | 3.91E-36 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 67 | 244 | 2.2E-16 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 260 | 420 | 1.3E-49 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 260 | 404 | 5.1E-15 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 65 | 222 | 0.0012 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 296 | 2.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 381 | 398 | 2.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 359 | 377 | 2.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 323 | 339 | 2.3E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 341 | 356 | 2.3E-12 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_047061363.1 | 11S globulin seed storage protein 2-like [Lolium rigidum] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453GWH8 | 11S globulin OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology