Basic Information
Locus ID:
gene-QYE76_058888
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 358189403 | 358190781 | + | gene-QYE76_058888 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 37,420.31 Da | 30.16 | 87.62 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 196 | 350 | 8.65948E-78 | - |
| Pfam | PF00190 | Cupin | 17 | 79 | 1.2E-8 | IPR006045 |
| Pfam | PF00190 | Cupin | 194 | 336 | 2.3E-21 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 13 | 342 | 4.46E-38 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 83 | 177 | 1.9E-9 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 14 | 81 | 2.2E-8 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 193 | 353 | 8.5E-50 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 13 | 155 | 1.2E-11 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 193 | 337 | 5.1E-15 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 209 | 229 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 256 | 272 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 274 | 289 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 292 | 310 | 1.1E-12 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 314 | 331 | 1.1E-12 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_047061363.1 | 11S globulin seed storage protein 2-like [Lolium rigidum] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6A1J5 | 11S seed storage protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology