Basic Information
Locus ID:
gene-QYE76_058712
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 352816217 | 352823123 | - | gene-QYE76_058712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 116,463.88 Da | 40.28 | 67.33 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 92 | 137 | 2.2E-11 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 760 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 541 | - | - |
| Coils | Coil | Coil | 480 | 500 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051215693.1 | uncharacterized protein LOC127333345 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A8J5TKY2 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0014g46908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |