Basic Information
Locus ID:
gene-QYE76_058420
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 344497024 | 344506715 | + | gene-QYE76_058420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 69,520.03 Da | 37.23 | 89.37 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 152 | 194 | 1.59053E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 152 | 195 | 9.9E-6 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 306 | 591 | 2.1E-39 | IPR000719 |
| SUPERFAMILY | SSF54106 | LysM domain | 150 | 195 | 1.44E-7 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 593 | 1.62E-61 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 144 | 200 | 1.4E-8 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 608 | 1.2E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 372 | 5.7E-23 | - |
| SMART | SM00220 | serkin_6 | 305 | 593 | 2.8E-22 | IPR000719 |
| SMART | SM00257 | LysM_2 | 151 | 195 | 5.9E-4 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 593 | 35.071415 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 150 | 194 | 11.18549 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 435 | 447 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_020201716.1 | L-type lectin-domain containing receptor kinase IX.2 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 0 | |
| TrEMBL | M8CBM6 | Lectin-domain containing receptor kinase A4.2 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0538650.1, HORVU.MOREX.r3.6HG0538670.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_016500, gene-QYE76_058420 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0202282, Pt_Chr0601036, Pt_Chr0601042 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG062990 |
| Poaceae | Triticum aestivum | 4 | TraesCS3B02G588200.1, TraesCS4B02G387600.1 ... |