Basic Information
Locus ID:
gene-QYE76_058320
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 341998230 | 341998610 | - | gene-QYE76_058320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 14,105.32 Da | 24.22 | 108.33 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 11 | 70 | 1.4E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 74 | 109 | 2.37E-6 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 71 | 1.58E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 78 | 108 | 8.4E-9 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 5 | 77 | 5.4E-21 | - |
| SMART | SM00213 | ubq_7 | 9 | 73 | 3.8E-12 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 9 | 70 | 13.467295 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_051222168.1 | uncharacterized protein LOC127340465 [Lolium perenne] | 0 |
| P62972 | Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6U5T9 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_058320, gene-QYE76_058321, gene-QYE76_058937 |