Basic Information
Locus ID:
gene-QYE76_058039
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 333902846 | 333903743 | + | gene-QYE76_058039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 30,045.05 Da | 52.02 | 74.34 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 53 | 2.0E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 77 | 2.22E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 58 | 8.9E-11 | - |
| SMART | SM00256 | fbox_2 | 13 | 53 | 3.1E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 7 | 53 | 9.68293 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52610.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044345744.1 | uncharacterized protein LOC123066801 [Triticum aestivum] | 0 |
| Q9LTF6 | Putative F-box protein At5g52610 OS=Arabidopsis thaliana OX=3702 GN=At5g52610 PE=4 SV=1 | 0 | |
| TrEMBL | R7VZA7 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0316550, gene-QOZ80_4BG0347750 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.4HG0414150.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 17 | gene-QYE76_026431, gene-QYE76_026432, gene-QYE76_026433 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G006550, Oco11G007950 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G105400 |
| Poaceae | Puccinellia tenuiflora | 6 | Pt_Chr0100957, Pt_Chr0108093, Pt_Chr0108094, Pt_Chr0604534 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr23G012460, Chr26G007060 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G588900, Tel6E01G732600 |
| Poaceae | Triticum aestivum | 17 | TraesCS3A02G500300.1, TraesCS3A02G500800.1.cds1 ... |