Basic Information
Locus ID:
gene-QYE76_058024
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
strictosidine synthase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 333477200 | 333486418 | + | gene-QYE76_058024 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 98,369.38 Da | 49.86 | 92.78 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 113 | 203 | 1.7E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 554 | 616 | 4.56E-11 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 545 | 662 | 1.1E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 813 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 817 | - | - |
| Coils | Coil | Coil | 669 | 689 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048445093.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC125479607, partial [Pyrus x bretschneideri] | 0 |
| TrEMBL | A0A2Z6P0N9 | RNA-directed DNA polymerase OS=Trifolium subterraneum OX=3900 GN=TSUD_290840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |