Basic Information
Locus ID:
gene-QYE76_057749
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 325821988 | 325822680 | - | gene-QYE76_057749 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 25,996.79 Da | 50.73 | 82.26 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 158 | 200 | 8.6E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 157 | 206 | 4.78E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 154 | 201 | 1.3E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 158 | 199 | 7.3E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 158 | 200 | 12.622055 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 230 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07225.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044345416.1 | uncharacterized protein LOC123066397 [Triticum aestivum] | 0 |
| Q803I8 | E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6H534 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0314330.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_057748, gene-QYE76_057749 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G459400.1.cds1, TraesCS3A02G460600.1.cds1 ... |