Basic Information
Locus ID:
gene-QYE76_057748
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 325819680 | 325820051 | - | gene-QYE76_057748 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 14,352.92 Da | 80.79 | 68.13 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 34 | 76 | 1.8E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 32 | 82 | 1.08E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 121 | 4.6E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 34 | 75 | 2.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 34 | 76 | 12.326995 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 112 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07225.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051222053.1 | uncharacterized protein LOC127340325 [Lolium perenne] | 0 |
| TrEMBL | A0A453GI08 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0314330.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_057748, gene-QYE76_057749 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G459400.1.cds1, TraesCS3A02G460600.1.cds1 ... |