Basic Information
Locus ID:
gene-QYE76_057731
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 325189095 | 325189817 | + | gene-QYE76_057731 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 26,530.20 Da | 60.07 | 80.62 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 171 | 212 | 6.3E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 166 | 217 | 4.29E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 162 | 220 | 6.6E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 172 | 211 | 5.1E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 172 | 212 | 12.872856 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051222039.1 | uncharacterized protein LOC127340310 [Lolium perenne] | 0 |
| TrEMBL | A0A8I6WYT2 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0204300.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_057712, gene-QYE76_057728, gene-QYE76_057729 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G511100.1.cds1, TraesCS2D02G512500.1.cds1 |