Basic Information
Locus ID:
gene-QYE76_057729
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 325176092 | 325176811 | + | gene-QYE76_057729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 26,445.19 Da | 58.83 | 77.70 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 170 | 211 | 5.3E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 165 | 217 | 1.74E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 161 | 219 | 7.0E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 171 | 210 | 9.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 171 | 211 | 12.607302 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051222044.1 | uncharacterized protein LOC127340315 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6B777 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0204300.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_057712, gene-QYE76_057728, gene-QYE76_057729 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G511100.1.cds1, TraesCS2D02G512500.1.cds1 |