Basic Information
Locus ID:
gene-QYE76_057728
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 325151569 | 325152326 | + | gene-QYE76_057728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 23,125.42 Da | 56.22 | 72.70 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 138 | 179 | 1.4E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 133 | 185 | 4.04E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 187 | 1.8E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 139 | 178 | 4.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 139 | 179 | 12.710573 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051222043.1 | uncharacterized protein LOC127340314 [Lolium perenne] | 0 |
| TrEMBL | A0A8I6XQY3 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0204300.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_057712, gene-QYE76_057728, gene-QYE76_057729 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G511100.1.cds1, TraesCS2D02G512500.1.cds1 |