Basic Information
Locus ID:
gene-QYE76_057713
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 324793402 | 324801976 | - | gene-QYE76_057713 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 149,187.88 Da | 47.64 | 87.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 990 | 1108 | 1.02347E-56 | - |
| CDD | cd00303 | retropepsin_like | 480 | 577 | 1.90486E-12 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 180 | 270 | 3.6E-9 | IPR005162 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 959 | 1057 | 4.8E-34 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 746 | 1091 | 3.78E-97 | IPR043502 |
| SUPERFAMILY | SSF50630 | Acid proteases | 477 | 585 | 4.84E-5 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 905 | 998 | 2.2E-27 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 738 | 826 | 1.4E-16 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 827 | 895 | 7.9E-14 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 461 | 599 | 9.0E-18 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| Coils | Coil | Coil | 1195 | 1215 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021744072.1 | uncharacterized protein LOC110710127 [Chenopodium quinoa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |