Basic Information
Locus ID:
gene-QYE76_057712
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 324718403 | 324719879 | - | gene-QYE76_057712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 36,779.10 Da | 55.74 | 77.01 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 257 | 300 | 1.2E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 258 | 304 | 4.54E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 248 | 310 | 5.4E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 259 | 299 | 6.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 259 | 300 | 12.238477 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 51 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047056241.1 | uncharacterized protein LOC124662447 [Lolium rigidum] | 0 |
| TrEMBL | M8BDA4 | RING-H2 finger protein ATL3C OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0204300.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_057712, gene-QYE76_057728, gene-QYE76_057729 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G511100.1.cds1, TraesCS2D02G512500.1.cds1 |