HalophFGD

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Basic Information
Locus ID: gene-QYE76_057707
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 324628615 324630429 - gene-QYE76_057707
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.83 67,000.62 Da 59.01 91.01 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 532 571 6.6E-8 IPR006566
Pfam PF00646 F-box domain 68 103 7.6E-4 IPR001810
Pfam PF00646 F-box domain 18 59 8.0E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 15 54 7.33E-9 IPR036047
SUPERFAMILY SSF81383 F-box domain 66 105 1.14E-8 IPR036047
SUPERFAMILY SSF52047 RNI-like 263 350 6.28E-8 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 259 547 3.9E-9 IPR032675
Gene3D G3DSA:1.20.1280.50 - 6 58 6.7E-6 -
Gene3D G3DSA:1.20.1280.50 - 59 106 8.7E-6 -
SMART SM00256 fbox_2 71 110 2.3 IPR001810
SMART SM00256 fbox_2 21 61 0.26 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 211 241 - -
MobiDBLite mobidb-lite consensus disorder prediction 218 241 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G18780.3 - 0
RefSeq XP_051222549.1 uncharacterized protein LOC127340831 [Lolium perenne] 0
TrEMBL A0A077RWG9 FBD domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF116200140CFD_c1 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.840.V1.1, AsparagusV1_03.841.V1.1
Poaceae Echinochloa crus-galli 16 AH05.2790, AH09.546, AH09.573, AH09.577, BH04.1290, BH09.662 ...
BH04.2137, BH04.2144, CH03.599, CH05.2891, CH05.2893, CH09.2376, CH09.2706, CH09.2708, CH09.2709, CH09.665
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_2AG0114350, gene-QOZ80_4AG0324470 ...
gene-QOZ80_5AG0376320, gene-QOZ80_5BG0423540, gene-QOZ80_9AG0690900, gene-QOZ80_9AG0690910, gene-QOZ80_9BG0715310, gene-QOZ80_9BG0717210, gene-QOZ80_9BG0717220
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0106560.1.CDS1 ...
HORVU.MOREX.r3.2HG0106730.1.CDS1, HORVU.MOREX.r3.2HG0194620.1.CDS1, HORVU.MOREX.r3.2HG0200500.1.CDS1, HORVU.MOREX.r3.2HG0200520.1.CDS1, HORVU.MOREX.r3.2HG0200660.1.CDS1, HORVU.MOREX.r3.3HG0313980.1.CDS1
Poaceae Lolium multiflorum 37 gene-QYE76_009133, gene-QYE76_018843, gene-QYE76_019818 ...
gene-QYE76_026968, gene-QYE76_028965, gene-QYE76_036425, gene-QYE76_038437, gene-QYE76_038440, gene-QYE76_038449, gene-QYE76_038450, gene-QYE76_038454, gene-QYE76_038459, gene-QYE76_039080, gene-QYE76_039893, gene-QYE76_039896, gene-QYE76_041884, gene-QYE76_047124, gene-QYE76_047126, gene-QYE76_047128, gene-QYE76_047130, gene-QYE76_047133, gene-QYE76_047135, gene-QYE76_047140, gene-QYE76_047142, gene-QYE76_047145, gene-QYE76_047147, gene-QYE76_047150, gene-QYE76_047154, gene-QYE76_047158, gene-QYE76_049310, gene-QYE76_049311, gene-QYE76_057702, gene-QYE76_057707, gene-QYE76_065808, gene-QYE76_065812, gene-QYE76_065819, gene-QYE76_065824
Poaceae Oryza coarctata 1 Oco08G002160
Poaceae Oryza sativa 6 LOC_Os04g19810.1, LOC_Os04g19920.1, LOC_Os05g39300.1 ...
LOC_Os11g33180.1, LOC_Os11g33210.1, LOC_Os11g42310.1
Poaceae Paspalum vaginatum 5 gene-BS78_04G092800, gene-BS78_05G225800 ...
gene-BS78_05G226000, gene-BS78_09G116200, gene-BS78_09G116400
Poaceae Puccinellia tenuiflora 8 Pt_Chr0300409, Pt_Chr0300411, Pt_Chr0300412, Pt_Chr0300435 ...
Pt_Chr0305575, Pt_Chr0305577, Pt_Chr0404384, Pt_Chr0500148
Poaceae Sporobolus alterniflorus 4 Chr09G009220, Chr16G004370, Chr16G004500, Chr26G003030
Poaceae Thinopyrum elongatum 8 Tel1E01G132600, Tel2E01G165600, Tel2E01G790600 ...
Tel2E01G829500, Tel2E01G829900, Tel2E01G830400, Tel2E01G830600, Tel3E01G721600
Poaceae Triticum dicoccoides 13 gene_TRIDC1BG010830, gene_TRIDC2AG008420 ...
gene_TRIDC2AG068990, gene_TRIDC2AG069110, gene_TRIDC2BG009780, gene_TRIDC2BG071530, gene_TRIDC2BG074610, gene_TRIDC2BG074700, gene_TRIDC2BG074780, gene_TRIDC2BG074800, gene_TRIDC2BG074810, gene_TRIDC2BG074830, gene_TRIDC2BG074860
Poaceae Triticum aestivum 27 TraesCS1D02G064800.1, TraesCS2A02G075700.1.cds1 ...
TraesCS2A02G075900.1.cds1, TraesCS2A02G468600.1, TraesCS2A02G489200.1.cds1, TraesCS2B02G090500.1.cds1, TraesCS2B02G491500.1, TraesCS2B02G517100.1.cds1, TraesCS2B02G517300.1.cds1, TraesCS2B02G517900.1.cds1, TraesCS2B02G518200.1, TraesCS2D02G074600.1.cds1, TraesCS2D02G489500.1.cds1, TraesCS2D02G489800.1.cds1, TraesCS2D02G490200.1.cds1, TraesCS3A02G455300.1, TraesCS3A02G455400.1, TraesCS3B02G444700.1, TraesCS3B02G445800.1.cds1, TraesCS3B02G494100.1, TraesCS3B02G494400.1.cds1, TraesCS3B02G494900.1.cds1, TraesCS3B02G495000.1.cds1, TraesCS3B02G495100.1.cds1, TraesCS3D02G405600.1.cds1, TraesCS3D02G448200.1.cds1, TraesCS3D02G448300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.