Basic Information
Locus ID:
gene-QYE76_057624
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 322940782 | 322942516 | + | gene-QYE76_057624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.37 | 35,521.10 Da | 73.43 | 59.85 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 41 | 85 | 1.3E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 40 | 94 | 1.57E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 101 | 5.2E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 42 | 84 | 3.3E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 41 | 85 | 0.0065 | IPR011016 |
| SMART | SM01197 | FANCL_C_2 | 38 | 93 | 0.0014 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 42 | 85 | 13.123657 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 268 | - | - |
| Coils | Coil | Coil | 327 | 327 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051222015.1 | uncharacterized protein LOC127340285 [Lolium perenne] | 0 |
| TrEMBL | A0A0Q3J090 | RING-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_2g59685v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_057624, gene-QYE76_057627 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3AG063520, gene_TRIDC3BG071220 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G484400.1 |