HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_057617
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3 322753441 322754838 + gene-QYE76_057617
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.38 52,395.29 Da 52.48 80.58 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 13 52 4.7E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 10 55 1.57E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 10 54 1.0E-7 -
SMART SM00256 fbox_2 14 55 2.0E-5 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037479032.1 uncharacterized protein LOC119356207 [Triticum dicoccoides] 0
TrEMBL M8BEB1 Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.2HG0190990.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_057616, gene-QYE76_057617
Poaceae Puccinellia tenuiflora 6 Pt_Chr0301242, Pt_Chr0301243, Pt_Chr0301245, Pt_Chr0306809 ...
Pt_Chr0307080, Pt_Chr0307081
Poaceae Thinopyrum elongatum 1 Tel2E01G978200
Poaceae Triticum dicoccoides 1 gene_TRIDC2BG064650
Poaceae Triticum aestivum 10 TraesCS2A02G423000.1.cds1, TraesCS2B02G442200.1.cds1 ...
TraesCS2B02G442600.1.cds1, TraesCS2B02G601500.1.cds1, TraesCS2D02G420800.1.cds1, TraesCS2D02G594900.1, TraesCS3B02G483200.1.cds1, TraesCS3B02G483300.1.cds1, TraesCS3B02G483400.1.cds1, TraesCSU02G036200.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.