Basic Information
Locus ID:
gene-QYE76_057408
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 316632882 | 316636581 | + | gene-QYE76_057408 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 86,294.04 Da | 46.17 | 88.26 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 264 | 528 | 2.70196E-55 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 271 | 528 | 2.5E-38 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 178 | 496 | 1.73E-21 | IPR043502 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 250 | 528 | 17.628691 | IPR000477 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 771 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43760.1 | DNAse I-like superfamily protein. | 0 |
| RefSeq | XP_051197225.1 | uncharacterized protein LOC127310606 [Lolium perenne] | 0 |
| P14381 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1 | 0 | |
| TrEMBL | Q7XLJ3 | OSJNBa0009K15.17 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0009K15.17 PE=4 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 11 | gene-QYE76_006358, gene-QYE76_016631, gene-QYE76_025777 ... |