Basic Information
Locus ID:
gene-QYE76_057297
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 313274559 | 313278568 | - | gene-QYE76_057297 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 38,089.82 Da | 42.42 | 86.05 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 32 | 100 | 5.7E-25 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 184 | 245 | 2.1E-14 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 108 | 169 | 4.6E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 251 | 322 | 6.2E-20 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 171 | 247 | 2.93E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 27 | 101 | 2.69E-25 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 103 | 170 | 3.45E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 247 | 322 | 1.79E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 22 | 103 | 5.5E-34 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 104 | 173 | 5.8E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 247 | 327 | 3.6E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 174 | 246 | 1.1E-19 | - |
| SMART | SM00213 | ubq_7 | 106 | 170 | 1.2E-14 | IPR000626 |
| SMART | SM00213 | ubq_7 | 175 | 243 | 7.5E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 30 | 101 | 1.3E-22 | IPR000626 |
| SMART | SM00213 | ubq_7 | 249 | 320 | 1.5E-19 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 249 | 324 | 19.281326 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 30 | 101 | 21.763721 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 106 | 167 | 14.033455 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 175 | 247 | 18.475636 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 40 | 60 | 1.4E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 61 | 81 | 1.4E-23 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 82 | 103 | 1.4E-23 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.3 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_047083311.1 | polyubiquitin-like [Lolium rigidum] | 0 |
| P0CH27 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Trypanosoma cruzi OX=5693 PE=2 SV=1 | 0 | |
| TrEMBL | A0A090MCP0 | Ubiquitin conserved site OS=Ostreococcus tauri OX=70448 GN=OT_ostta12g01170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_057297, gene-QYE76_071881 |