Basic Information
Locus ID:
gene-QYE76_057190
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 310670024 | 310671512 | - | gene-QYE76_057190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 34,822.51 Da | 28.82 | 90.67 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 1 | 144 | 2.23586E-51 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 171 | 325 | 9.40325E-75 | - |
| Pfam | PF00190 | Cupin | 169 | 311 | 2.7E-20 | IPR006045 |
| Pfam | PF00190 | Cupin | 6 | 127 | 1.4E-17 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 4 | 317 | 1.69E-43 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 153 | 1.9E-27 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 168 | 328 | 8.3E-48 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 168 | 312 | 4.2E-12 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 2 | 130 | 5.3E-15 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 289 | 306 | 8.5E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 249 | 264 | 8.5E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 184 | 204 | 8.5E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 267 | 285 | 8.5E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 231 | 247 | 8.5E-13 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_047061256.1 | 12S seed storage globulin 1-like [Lolium rigidum] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6A1J5 | 11S seed storage protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology