Basic Information
Locus ID:
gene-QYE76_057167
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 310204067 | 310212179 | - | gene-QYE76_057167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 85,404.08 Da | 47.83 | 87.87 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 200 | 290 | 1.7E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 606 | 668 | 3.34E-12 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 597 | 685 | 5.8E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 80 | - | - |
| Coils | Coil | Coil | 721 | 741 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022861324.1 | uncharacterized protein LOC111381741 [Olea europaea var. sylvestris] | 0 |
| TrEMBL | A0A2Z6P0N9 | RNA-directed DNA polymerase OS=Trifolium subterraneum OX=3900 GN=TSUD_290840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |