Basic Information
Locus ID:
gene-QYE76_056905
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 302212581 | 302222985 | - | gene-QYE76_056905 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 106,748.49 Da | 50.61 | 77.29 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 272 | 362 | 2.4E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 635 | 719 | 2.56E-20 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 553 | 699 | 2.5E-20 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 791 | - | - |
| Coils | Coil | Coil | 916 | 936 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021736290.1 | uncharacterized protein LOC110702854 [Chenopodium quinoa] | 0 |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |