Basic Information
Locus ID:
gene-QYE76_056333
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 283835849 | 283841902 | + | gene-QYE76_056333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 161,290.05 Da | 39.12 | 106.85 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 609 | 809 | 2.48785E-106 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1234 | 1454 | 5.2743E-105 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 917 | 1210 | 2.29414E-88 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 295 | 583 | 3.36971E-100 | IPR044746 |
| Pfam | PF00664 | ABC transporter transmembrane region | 299 | 562 | 2.3E-20 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1253 | 1401 | 5.1E-29 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 627 | 761 | 6.2E-20 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 919 | 1163 | 1.8E-29 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1225 | 1467 | 5.23E-65 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 917 | 1218 | 1.03E-51 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 606 | 830 | 1.98E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 285 | 591 | 2.09E-30 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 880 | 1217 | 2.1E-60 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 269 | 591 | 9.4E-48 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 592 | 841 | 4.6E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1221 | 1472 | 3.1E-77 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1262 | 1447 | 4.2E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 636 | 809 | 5.1E-12 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 609 | 832 | 23.489498 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 294 | 575 | 29.943249 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1236 | 1470 | 16.966923 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 919 | 1199 | 34.183369 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 734 | 748 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_051226715.1 | ABC transporter C family member 3-like isoform X1 [Lolium perenne] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | Q71CZ3 | Multidrug resistance associated protein MRP2 OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology