Basic Information
Locus ID:
gene-QYE76_056277
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
MYB3R-5
Description:
Myb-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 282117892 | 282128089 | + | gene-QYE76_056277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 70,223.03 Da | 32.80 | 90.03 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04049 | C2_putative_Elicitor-responsive_gene | 499 | 622 | 2.14945E-56 | - |
| CDD | cd00311 | TIM | 220 | 461 | 1.06E-122 | IPR000652 |
| Pfam | PF00168 | C2 domain | 500 | 595 | 1.8E-17 | IPR000008 |
| Pfam | PF00121 | Triosephosphate isomerase | 7 | 155 | 1.2E-42 | IPR000652 |
| Pfam | PF00121 | Triosephosphate isomerase | 221 | 460 | 6.0E-84 | IPR000652 |
| SUPERFAMILY | SSF51351 | Triosephosphate isomerase (TIM) | 215 | 461 | 1.7E-90 | IPR035990 |
| SUPERFAMILY | SSF51351 | Triosephosphate isomerase (TIM) | 3 | 157 | 6.54E-50 | IPR035990 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 493 | 630 | 2.81E-24 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 498 | 630 | 6.4E-26 | IPR035892 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 198 | 468 | 2.9E-112 | IPR013785 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 1 | 169 | 2.7E-59 | IPR013785 |
| SMART | SM00239 | C2_3c | 500 | 601 | 2.0E-13 | IPR000008 |
| TIGRFAM | TIGR00419 | tim: triose-phosphate isomerase | 7 | 156 | 8.7E-52 | IPR000652 |
| TIGRFAM | TIGR00419 | tim: triose-phosphate isomerase | 221 | 455 | 5.3E-87 | IPR000652 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 486 | 605 | 15.932611 | IPR000008 |
| ProSiteProfiles | PS51440 | Triosephosphate isomerase (TIM) family profile. | 5 | 202 | 46.000038 | IPR000652 |
| ProSiteProfiles | PS51440 | Triosephosphate isomerase (TIM) family profile. | 219 | 462 | 79.845512 | IPR000652 |
| ProSitePatterns | PS00171 | Triosephosphate isomerase active site. | 379 | 389 | - | IPR020861 |
| Hamap | MF_00147_B | Triosephosphate isomerase [tpiA]. | 218 | 462 | 56.531189 | IPR022896 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55440.1 | triosephosphate isomerase. Encodes triosephosphate isomerase. | 0 |
| RefSeq | XP_004970538.2 | triosephosphate isomerase, cytosolic [Setaria italica] | 0 |
| P21820 | Triosephosphate isomerase, cytosolic OS=Coptis japonica OX=3442 PE=2 SV=1 | 0 | |
| TrEMBL | K7B045 | Triosephosphate isomerase (Fragment) OS=Phleum pratense OX=15957 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology